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| + | ====== P-value adjustment for multiple testing ====== | ||
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| + | Three methodologies are implemented in [[Babelomics]]. The method proposed by //Holm// controls the **FWER** (family-wise error rate). The other two methods control the **FDR** (false discovery rate). One of them uses the algorithm proposed by //Benjamini & Hochberg// and the other one implements the **q-values** method proposed by //Storey//. Our implementations make use of the p.adjust function in the stats [[R]] package and the [[http://bioconductor.org/packages/2.0/bioc/html/qvalue.html|qvalues]] package from [[Bioconductor]]. | ||
