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create_annotation [2010/06/02 08:53] ealloza |
create_annotation [2017/05/24 10:36] (current) |
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| + | ====== Create annotation ====== | ||
| + | You can use this module to retrieve functional information (gene ontologies, domains, pathways, regulatory elements...) about the genes in your dataset or the whole genome. This new annotation list can be forwarded into Babelomics //Functional Analysis// tools as a new database named as **Your annotations**. | ||
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| + | Upload your //idlist// of interest or retrieve information for the whole genome, and select which one of the functional databases is of your interest. Finally decide the output format for the annotation: | ||
| + | * **Compact** | ||
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| + | YDR130C GO:0000087,GO:0000278,GO:0000280 | ||
| + | YKL175W GO:0006811 | ||
| + | YDR473C GO:0006396,GO:0006397,GO:0008380,GO:0016071 | ||
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| + | * **Extended** | ||
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| + | YDR130C GO:0000087 | ||
| + | YDR130C GO:0000278 | ||
| + | YDR130C GO:0000280 | ||
| + | YKL175W GO:0006811 | ||
| + | YDR473C GO:0006396 | ||
| + | YDR473C GO:0006397 | ||
| + | YDR473C GO:0008380 | ||
| + | YDR473C GO:0016071 | ||
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| + | The tool **Create annotation** will generate an annotation (//Gene vs. Annotation//, //Compact Annotation//) that can be forwarded and used as a **Your annotations** data in your functional analysis in //Babelomics Functional Analysis tools//:\\ | ||
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| + | {{:images:annotation:yourannot.jpg?550|Where you can upload the annotation created by this tool}} | ||
