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eds_apocrine_tumours [2010/09/28 17:55] dmontaner |
eds_apocrine_tumours [2017/05/24 10:36] (current) |
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| + | ====== Apocrine Breast Cancer Tumours ====== | ||
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| + | **49** [[Affymetrix]] U133A chips form breast cancer tumour samples ([[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=Pubmed&term=15897907|Farmer et al. 2005]]). | ||
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| + | Samples are classified into: **apocrine**,** basal** and **luminal**. | ||
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| + | Data where download form [[http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE1561|GEO GSE1561]]. | ||
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| + | __Files:__ | ||
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| + | * {{:example_data:apocrine_tumours:apocrine_tumours.zip|Raw data }}: **49** [[Affymetrix]] U133A [[raw data]] files ([[CEL]] files). Arrays + **sample information** are provided in a **zip** file. (173 MB) | ||
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| + | * {{:example_data:apocrine_tumours:apocrine_tumours_sampleinfo.txt|Sample information}}: Array classification in a **tab** delimited **text** file. | ||
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| + | * {{:example_data:apocrine_tumours:apocrine_tumours_rma.txt|Normalized data}}: using **rma** method. **Tab** delimited **text** file. | ||
