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eds_apocrine_tumours [2010/09/28 17:55]
dmontaner
eds_apocrine_tumours [2017/05/24 10:36] (current)
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 +====== Apocrine Breast Cancer Tumours ======
 +
 +**49** [[Affymetrix]] U133A chips form breast cancer tumour samples ([[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=Pubmed&term=15897907|Farmer et al. 2005]]).
 +
 +Samples are classified into: **apocrine**,** basal** and **luminal**.
 +
 +Data where download form [[http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE1561|GEO GSE1561]].
 +
 +__Files:__
 +
 +  * {{:example_data:apocrine_tumours:apocrine_tumours.zip|Raw data }}: **49** [[Affymetrix]] U133A [[raw data]] files ([[CEL]] files). Arrays + **sample information** are provided in a **zip** file. (173 MB)
 +
 +  * {{:example_data:apocrine_tumours:apocrine_tumours_sampleinfo.txt|Sample information}}: Array classification in a **tab** delimited **text** file.
 +
 +  * {{:example_data:apocrine_tumours:apocrine_tumours_rma.txt|Normalized data}}: using **rma** method. **Tab** delimited **text** file.
  
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