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sidebar [2012/04/17 11:00]
pablo
sidebar [2017/05/24 10:36] (current)
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 +====== Presentation  ======
 +  * [[home|Babelomics]]
 +  * [[babelomics_team|Babelomics Team]]
 +  * [[Publications|Publications]]
 +  * [[history|History]]
 +  * [[resources|Resources]]
 +  * [[datasets|Example Datasets]]
 +
 +----
 +----
 +====== Web usage  ======
 +
 +  * [[user_account|User account]]
 +  * [[data_administration|Data administration]]
 +  * [[project_administration|Project administration]]
 +
 +====== Data Management  ======
 +  * [[data_downloading|Getting Data from GEO and Array Express]]
 +  * [[data_upload|Uploading Data]]
 +  * [[data_types|Data Types]]
 +
 +====== Data Preprocessing  ======
 +  * [[preprocessing|Data Preprocessing]]
 +  * [[edit_data|Edit Data]]
 +  * [[microarray_normalization|Microarray Normalization]]
 +  * [[datamatrix_preprocessing|Datamatrix Preprocessing]]
 +  * [[annotation|Annotation]]
 +
 +====== Expression Data Analysis ======
 +  * [[differential_expression|Differential Expression]]
 +  * [[predictors|Predictors]]
 +  * [[clustering|Clustering]]
 +  * [[biclustering|Biclustering]]
 +
 +====== Genomic Data Analysis ======
 +  * [[association_analysis|Association analysis]]
 +  * [[stratification|Stratification]]
 +
 +====== Functional Profiling Analysis ======
 +  *[[enrichment_analysis|Simple enrichment analysis]]
 +  *[[gene_set_analysis|Set enrichment analysis]]
 +  *[[snow|Network enrichment analysis]]
 +  *[[Subnetwork enrichment analysis | Subnetwork enrichment analysis]]
 +<!--  *[[module_entichment_analysis|Module enrichment analysis]]-->
 +
 +====== Functional Annotation ======
 +  * [[blast2go|Blast2GO]]
 +<!--
 +====== References ======
 +  * [[references|References by topics]]
 +-->
 +====== Utilities ======
 +  * [[microarray_raw_data_viewer|Microarray raw data viewer]]
 +  * [[gographviz|GoGraphViz]]
 +
 +====== Pipeline example ======
 +  * [[differential_expression_example|From GEO Differential Expression Analysis]]
 +  * [[fatigo_pipeline_example|From Differential Expression to Functional Analysis]]
  
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