TEAM: Targeted Enrichment Analysis and Management

These exercises show how to design and analyze panel genes in the clinical context oriented to diagnosis.

  • Input: one or several VCF files and a panel gene.
  • Output: different formats of results, including selected variants related to a specific disease.

We are working from TEAM. Several steps:

  1. Upload VCF files in TEAM and automatically these files will be indexed and annotated.
  2. Upload or design a panel of genes.
  3. Analyze your data.


Let's go to TEAM!
We have uploaded several VCF files for you. Now these files are indexed and annotated. So it is prepared to work.
You can check this data with user: gda password: gda

A. Analysis of gene panels

B. Design of panels