======Input Data=====
NetworkMiner needs a list of ordered proteins or genes according to a phenotypic parameter. This list has to contain one column with the proteins or genes, and could contain a second column with a number (the experimental parameter used to sort the list). Network Miner subdivides the list in a series of additives partitions. If only one column is provided, proteins are added one to one. If two columns are provided then proteins with equal phenotypic parameter are added together.

====== Upload data ======
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===== 1. Choose File =====
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Go to Upload Data and, in the Data File box, click on Choose File button and browse the directory where you have saved your file. **Data must be a text file with one or two columns** (the first one with the nodes id and the second one with a number). See an input example file: {{:example.txt|}}.

[[http://babelomics.bioinfo.cipf.es/upload.html|{{:upload_data.png?}}]]

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===== 2. Select format =====
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Click on Select format in order to indicate the type of data that you are uploading. You have to indicate whether you submit a list of genes, transcripts or proteins.

{{ :select_format.png?nolink& |}}

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===== 3. Add the Name and the description (optional) =====
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Several description fields can be attached to each of the files your are uploading. It is optional to fill them. But it is mandatory to enter a Data name to identify the file. This is the name that will be displayed afterwards in your job list and projects. 

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===== 4. Upload =====
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Finally, click on Upload to finish and wait until data has been loaded and validated.

{{ :validated.png?nolink& |}}

====== Proteins / genes Ids supported ======
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[[http://babelomics.bioinfo.cipf.es/|Babelomics]] database was implemented into Network Miner, therefore the most standard identifiers are accepted. See [[Protein / gene ids supported | here]] for more information.