Human Embryonic Stem Cells Under Hypoxia Conditions

A time course study. 16 Agilent one-color arrays.

Files:

Raw data: 16 Agilent arrays. Raw data files + sample information are provided in a zip file. (143 MB)

Sample information: Classification information of each sample (array). In a tab delimited text file.

Normalized data: using agilent background correction and quantiles between array normalization. Tab delimited text file. (8.000 genes)

The design of the data is as follows:

filename	samplename	time	oxlevel	replicate	timeindays	class
12h_21_1_251485017921_1_2.txt	12h_21_1	12h	21	1	0.5	normal
12h_21_2_251485017924_1_1.txt	12h_21_2	12h	21	2	0.5	normal
12h_5_1_251485017921_1_3.txt	12h_5_1	12h	5	1	0.5	hypoxia
12h_5_2_251485017924_1_2.txt	12h_5_2	12h	5	2	0.5	hypoxia
15d_21_1_251485017958_1_3.txt	15d_21_1	15d	21	1	15	normal
15d_21_2_251485017958_1_4.txt	15d_21_2	15d	21	2	15	normal
15d_5_1_251485017923_1_4.txt	15d_5_1	15d	5	1	15	hypoxia
15d_5_2_251485017957_1_3.txt	15d_5_2	15d	5	2	15	hypoxia
24h_21_1_251485017922_1_1.txt	24h_21_1	24h	21	1	1	normal
24h_21_2_251485017924_1_4.txt	24h_21_2	24h	21	2	1	normal
24h_5_1_251485017922_1_2.txt	24h_5_1	24h	5	1	1	hypoxia
24h_5_2_251485017956_1_1.txt	24h_5_2	24h	5	2	1	hypoxia
5d_21_1_251485017922_1_3.txt	5d_21_1	5d	21	1	5	normal
5d_21_2_251485017958_1_2.txt	5d_21_2	5d	21	2	5	normal
5d_5_1_251485017922_1_4.txt	5d_5_1	5d	5	1	5	hypoxia
5d_5_2_251485017956_1_3.txt	5d_5_2	5d	5	2	5	hypoxia